Yes. Owners of a registered mark in Japan obtain these rights: 

• Exclusive right to use the mark
• Right to object to succeeding conflicting applications
• Right to petition for the cancellation of a succeeding conflicting registration
• Right to take a legal action against third parties for infringing the sign
• Right to obtain payment or damages from third parties due to infringement
• Right to authorize third parties to use the mark
• Right to petition for the confiscation (by customs authorities) of counterfeit goods